Skip to main navigation menu Skip to main content Skip to site footer

SECTION B: LIFE SCIENCES

Vol. 5 No. 1 (2013)

Genetic Diversity and Conservation of the Misty Grouper (Hyporthodus mystacinus) in the Galapagos Islands, Ecuador

DOI
https://doi.org/10.18272/aci.v5i1.118
Submitted
September 29, 2015
Published
2013-04-08

Abstract

Overexploitation now threatens more than 90% of marine fisheries worldwide. Overfishing has been widely recognized as impacting species diversity and abundance; however, its effects on marine fish genetic diversity have been largely ignored. The groupers (Serranidae) are a commercially important family of fish in many parts of the world including in the Galapagos Islands. A recent assessment of the family by the groupers and wrasse specialist group (GWSG), suggested that the group might be particularly vulnerable to fishing, and it has also been suggested that their genetic diversity may be threatened due to overfishing [1]. One of the groupers studied, was the misty grouper Epinephelus mystacinus [2], recently renamed Hyporthodus mystacinus [3]. H. mystacinus was categorized as Least Concern (LC) in 2008 by the IUCN and in the GWSG final report, due to the fact that virtually nothing is known about its natural history [4, 5]. The final report of the GWSG states that all LC species should be the immediate focus of more data-gathering, especially in Southeast Asia and the Pacific islands [1]. The sampling of 108 fin clippings of misty groupers H. mystacinus through the Archipelago was conducted by Galapagos local fishermen. Following the procedures described in Craig et al.[6], DNA from the sample tissues was extracted, and new primers were developed from the microsatellite loci identified by Ramirez et al (2006) [7]. Our results suggest great levels of gene flow among the localities, due to the fact that there are no real geographic barriers to separate the individuals from one locality from the next. High genetic diversity has traditionally been associated with good health of populations, and may signal a good future for traditional fishing of H. mystacinus through sustainable management practices.

viewed = 1414 times

References

  1. GWSG. 2007. "Workshop for Global Red List: Assessments of Groupers. Family Serranidae; subfamily Epinephelinae". Groupers and Wrasses Specialist Group.
  2. Nelson, J. 1994. "Fishes of the World". Fishbase, Third edition. John Wiley & Sons, Inc., New York.
  3. Craig, M.; Hastings, P. 2007. "A molecular phylogeny of the groupers of the subfamily Ephinephelinae (Serranidae) with a revised classification of the Epinephelini". Ichthyological Research, 54: 1-17.
  4. Rocha, L.; Ferreira, B.; Choat, J.; Craig, M.; Sandovy, Y. 2008. "Epinephelus mystacinus". IUCN 2010. inIUCN Red List of Threatened Species.
  5. Heemstra, P.; Randall, J. 1993. "Groupers of the world (Femily Serranidae, Subfamily Ephinepelinae). An annotated and illustrated catalogue of the grouper, rockcod hind, coral grouper and lyretail species known to date". FAO species catalogue, 16.
  6. Craig, M.; Graham, R.; Torres, R.; Hyde, J.; Freitas, M.; Ferreira, B.; Hostim-Silva, M.; Gerhardinger, L.; Bertoncini, A.; Robertson, D. 2009. "How many species of goliath grouper are there? Cryptic genetic divergence in a threatened marine fish and theresurrection of a geopolitical species". Endangered Species Research, 7: 167-174.
  7. Ramirez, M.; Acevedo, J.; Planas, S.; Carlin, J.; Funk, S.; McMillan, O. 2006. "New Microsatellite resources for groupers (serranidae)". Molecular Ecology, 6(813-817).
  8. Toro, M.; Caballero, A. 2005. "Characterization and conservation of genetic diversity in subdivided populations". Philosophical Transactions of the Royal Society, 360: 1367-1378.
  9. Lande, R. 1982. "A Quantitative Genetic Theory of Life History Evolution". Ecology, 63(607-615).
  10. Polans, N.; Allard, R. 1989. "An experimental evaluation of the recovery potential of ryegrass populations for genetic stress resulting from restriction of population size". Evolution, 43: 1320-1324.
  11. Caro, T.; Laureson, M. 1994. "Ecological and Genetic Factors in Conservation: A Cautionary Tale.". Science, 263: 485-486.
  12. Amos, W.; Harwood, J. 1998. "Factors Affecting Levels of Genetic Diversity in Natural Populations.". Philosophical Transactions: Biological Sciences, 353: 177-186.
  13. Lande, R. 1998. "Demographic Stochasticity and Allele Effect on a Scale with Isotropic Noise". Oikos, 83: 353-358.
  14. Blomqvist, D.; Pauliny, A.; Larsson, M.; Flodin, L. 2010. "Trapped in the extinction vortex? Strong genetic effects in a declining vertebrate population". BMC Evolutionary Biology, 10: 1-9.
  15. Lande, R. 1976. "Natural Selection and Random Genetic Drift in Phenotypic Evolution". Evolution, 30(314-334).
  16. Lande, R. 1993. "Risks of Populations Extinction from Demographic and Environmental Stochasticity and Random Catastrophes". The American Naturalist, 142: 911-927.
  17. Lande, R. 1994. "Risk of Population Extinction from Fixation of New Deleterious Mutations". Evolution, 48: 1460-1469.
  18. Skaug, H. 2001. "Allele-Sharing Methods for Estimation of Population Size". Biometrics, 57: 750-756.
  19. Hastings, A.; Harrison, S. 1994. "Metapopulation dynamics and genetics". Ann. Rev. Ecol. Syst., 25(167-188).
  20. Cowen, R.; Lwiza, K.; Sponaugle, S.; Paris, C.; Olson, D. 2000. "Connectivity of Marine Populations: open or close". Science, 287: 857-859.
  21. Cowen, R. 2002. "Larval dispersal and retention and consequences for population connectivity. in Dynamics and Divseristy in a complex Ecosystem". Academic Press, San Diego.
  22. Gilg, M.; Hilbish, T. 2003. "The geography of marine larval dispersal: coupling of genetics with fine-scale physical oceanography". Ecology, 84: 2989-2998.
  23. Hauser, L.; Adcock, G.; Smith, P.; Ramirez, H.; Carvalho, G. 2002. "Loss ofmicrosatellite diversity and low effective population size in overexploited population of New Zealand snapper (Pargus auratus)". Proceedings of the National Academy of Sciences of the United States of America, 99: 11742-11747.
  24. Brown, W. 1983. "Diversity and Genetic Vulnerability: An Appraisal". Springer on behalf of New York Botanical Garden Press. Economic Botany, 37: 4-12.
  25. Worm, B.; Hilborn, R.; Baum, J.; Branch, T.; Collie, J.; Costello, C.; Fogarty, M.; Fulton, E.; Hutchings, J.; Jennings, S.; Jensen, O.; Lotze, H.; Mace, P.; McClanahan, T.; Minto, C.; Palumbi, S.; Parma, A.; Ricard, D.; Rosenberg, A.; Watson, R.; Zeller, D. 2009. "Rebuilding Global Fisheries". Science, 325: 578-585.
  26. Martins, W. S.; Lucas, D.; Neves, K.; Bertioli, D. 2009. "A Web Software for MicroSatellite Marker Development". Bioinformation, 3(6): 282-283.
  27. Murillo, J.; Chasiluisa, C.; Molina, L.; Moreno, J.; Andrade, R. 2003. "Pesca blanca y pesquerías que duran todo el año en Galápagos, 2002. In: Evaluación de las pesquerías en la Reserva Marina de Galápagos. Informe Compendio 2002". Fundación Charles Darwin y Servicio Parque Nacional Galápagos, Santa Cruz, Galápagos, Ecuador.,: 97-124.
  28. Molina, L.; Chasiluisa, C.; Murillo, J.; Moreno, J.; Nicolaides, F.; Barreno, J.; Vera, M.; Bautil, B. 2004. "Pesca blanca y pesquerías durante todo el año, 2003". Fundación Charles Darwin y Dirección Parque Nacional Galápago, Santa Cruz, Galápagos, Ecuador.
  29. Benbousa, H.; Jacquemin, J.; Baudoin, J.; Mergeai, G. 2006. "Optimization of a reliable, fast, cheap and sensitive silver staining method to detect SSR markers in polyacrylamide gels". Biotechnologie, Agronomie Société et Environnement, 10: 77-81.
  30. Creste, S.; Tulmann-Neto, A.; Figueira, A. 2001. "Detection of Single Sequence Repeat Polymorphisms in denaturing polyacrylamide sequencing gels by silver staining". Plant Molecular Biology Reporter, 19: 299-306.
  31. Scanalytics Inc. 2011. "Gene Profiler 4.0.5 software".
  32. Peakall, R.; Smouse, P. 2006. "GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research". Molecular Ecology Notes, 6: 288-295.
  33. Nei, M. 1978. "Estimation of Average Heterozygosity and Genetic Distance from a Small Number of Individuals". Genetics, 89: 583-590.
  34. Slatkin, M. 1985. "Gene Flow in Natural Populations". Annual Review of Ecology and Systematics, 16: 393-430.
  35. Frankham, R.; Ballou, J.; Briscoe, D. 2002. "Introduction to Conservation Genetics". Cambridge University Press, Cambridge UK.
  36. Hanski, I.; Gaggiotti, O. 2004. "Ecology, Genetics, and Evolution of Metapopulations". "Elsevier Academic Press, New York".
  37. Freeland, J. 2005. "Molecular Ecology". John Wiley & Sons, Ltd, West Sussex PO19 8SQ, England.
  38. Pauly, D. 1995. "Anecdotes and the shifting baseline syndrome of fisheries". Trends in Ecology and Evolution, 10: 430.
  39. Birkeland, C.; Dayton, P. 2005. "The importance in Fishery management of leaving the big ones". Trends in Ecology and Evolution, 20: 356-358.
  40. Reed, D.; Frankham, R. 2003. "Correlation between Fitness and Genetic Diversity". Conservation Biology, 17: 230-237.
  41. Bell, J.; Okamura, B. 2005. "Low Genetic Diversity in a Marine Nature Reserve: Re-Evaluating Diversity Criteria in Reserve Design". Proceedings: Biological Sciences, 272: 1067-1074.
  42. Parque Nacional Galápagos. 2007. "Galapagos Report 2006-2007". Estación Científica Charles Darwin.
  43. Sanchirico, J.; Malvadkar, U. 2005. "No-take Zones as Optimal Fishery Management". NOAA.
  44. Gerber, L.; Botsford, L.; Hastings, A.; Possingham, H.; Gaines, S.; Palumbi, S.; Andelman, S. 2003. "Population models for marine reserve design: A retrospective and prospective synthesis". Ecol. Appl., 13(S47-S64).
  45. Guichard, F.; Levin, S.; Hastings, A.; Siegel, D. 2004. "Toward a Dynamic Metacommunity Approach to Marine Reserve Theory". Bioscience, 54(11): 1003-1011.
  46. Hoelzel, A.; Fleischer, R.; Campagna, C.; Boeuf, B.; G., A. 2002. "Impact of a population bottleneck on symmetry and genetic diversity in the northern elephant seal". Journal of Evolutionary Biology, 15: 567-575.